MLOC_18503 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.464665.212714.171152.84639
LEAShoots from the seedlings (10 cm shoot stage)9.280488.926248.291115.79946
INF1Young developing inflorescences (5mm)9.220899.4131110.32125.52724
INF2Developing inflorescences (1-1.5 cm)13.711711.851810.695210.2654
ROORoots from the seedlings (10 cm shoot stage)4.320588.588397.44116.08732
NODDeveloping tillers at six leaf stage, 3rd internode4.703184.142224.3358511.454
CAR5Developing grain, bracts removed (5 DPA)5.188624.364735.560033.33412
CAR15Developing grain, bracts removed (15 DPA)3.961082.099332.860335.30215



CDS Structure of MLOC_18503






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18503.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18503.1CUST_11575_PI427708083AvailableAvailablecontig_1580816 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g16130.4 -2 1e-47 172 80/95 (84%) 13103.m01913 protein CAMK_CAMK_like_ULKh_APGy.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT2G37840.2 -2 1e-39 149 72/98 (73%) Protein kinase superfamily protein | chr2:15853108-15856047 FORWARD LENGTH=596