- Predicted Gene MLOC_18498
MLOC_18498 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.35461 | 1.40918 | 1.72114 | 1.6543 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.88283 | 0.874912 | 3.46803 | 1.41603 |
| INF1 | Young developing inflorescences (5mm) | 7.94052 | 7.45971 | 6.76023 | 4.72286 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.6999 | 6.26577 | 4.55848 | 4.49759 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 1.41338 | 3.1528 | 2.2068 | 2.3655 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.168134 | 0.167229 | 0.791716 | 0.647894 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.33333 | 2.11233 | 2.08773 | 1.33742 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.57828 | 1.59622 | 1.12443 | 1.72382 |
CDS Structure of MLOC_18498
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18498.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os11g07500.1 |
-1 |
3e-12 |
68 |
34/37 (92%) |
13111.m00784 protein DSHCT domain containing protein, expressed |
| TAIR PP10 |
AT2G06990.1 |
-1 |
8e-11 |
63 |
32/37 (86%) |
| Symbols: HEN2 | RNA helicase, ATP-dependent, SK12/DOB1 protein | chr2:2895135-2900909 FORWARD LENGTH=995 |