MLOC_18474 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1525290.1415260.03916450.130306
LEAShoots from the seedlings (10 cm shoot stage)1.81035.460954.909963.15295
INF1Young developing inflorescences (5mm)00.02702030.03021520.0449586
INF2Developing inflorescences (1-1.5 cm)0000.0102628
ROORoots from the seedlings (10 cm shoot stage)1.991960.33840.2532440.630728
NODDeveloping tillers at six leaf stage, 3rd internode1.209680.1211340.7473130.715944
CAR5Developing grain, bracts removed (5 DPA)00.02791010.03019170.0265501
CAR15Developing grain, bracts removed (15 DPA)0.0249488000.0878254



CDS Structure of MLOC_18474






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18474.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18474.1CUST_9691_PI427708080AvailableAvailablecontig_1580700 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g04540.1 -1 0.0 769 437/514 (85%) 13108.m00435 protein decarboxylase, putative, expressed
TAIR PP10 AT2G20340.1 -1 2e-142 427 236/488 (48%) Pyridoxal phosphate (PLP)-dependent transferases superfamily protein | chr2:8779804-8782490 FORWARD LENGTH=490