MLOC_18471 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains8.2877614.741313.718213.8985
LEAShoots from the seedlings (10 cm shoot stage)18.802810.848.5354910.5742
INF1Young developing inflorescences (5mm)10.07789.868269.001839.13924
INF2Developing inflorescences (1-1.5 cm)10.05217.0752111.526910.8843
ROORoots from the seedlings (10 cm shoot stage)15.456522.107721.626925.5686
NODDeveloping tillers at six leaf stage, 3rd internode33.763715.121120.626841.9557
CAR5Developing grain, bracts removed (5 DPA)7.633277.788776.450967.92456
CAR15Developing grain, bracts removed (15 DPA)1.092570.890811.174942.74178



CDS Structure of MLOC_18471






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18471.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18471.1CUST_2659_PI427708083AvailableAvailablecontig_1580694 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g48630.2 -3 2e-81 269 131/173 (76%) 13107.m05212 protein ethylene-insensitive 3, putative, expressed
TAIR PP10 AT3G20770.1 -3 1e-66 230 107/145 (74%) | Symbols: EIN3, AtEIN3 | Ethylene insensitive 3 family protein | chr3:7260702-7262588 REVERSE LENGTH=628