- Predicted Gene MLOC_18468
MLOC_18468 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 0.243954 | 0.12784 | 0.0560551 | 0.142548 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 3.60293 | 0.31467 | 2.48627 | 1.74967 |
| INF1 | Young developing inflorescences (5mm) | 0.166297 | 0.0386855 | 0.041092 | 0.0874469 |
| INF2 | Developing inflorescences (1-1.5 cm) | 0.105159 | 0 | 0.0424494 | 0.0798471 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 58.3553 | 27.248 | 49.0641 | 36.9344 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.053914 | 0.0683491 | 0.166836 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 0.132317 | 0.249953 | 0.168745 | 0.231233 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.0639971 | 0 | 0.0458811 | 0.183609 |
CDS Structure of MLOC_18468
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18468.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g01270.1 |
+1 |
4e-136 |
396 |
183/228 (80%) |
13103.m00042 protein expansin precursor, putative, expressed |
| TAIR PP10 |
AT1G65680.1 |
+1 |
4e-68 |
219 |
112/222 (50%) |
| Symbols: ATEXPB2, EXPB2, ATHEXP BETA 1.4 | expansin B2 | chr1:24427266-24428399 FORWARD LENGTH=273 |