MLOC_18416 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains79.5578124.041108.215115.922
LEAShoots from the seedlings (10 cm shoot stage)51.399717.942217.306527.3024
INF1Young developing inflorescences (5mm)194.83182.285148.903152.878
INF2Developing inflorescences (1-1.5 cm)112.53130.906114.066133.855
ROORoots from the seedlings (10 cm shoot stage)31.965180.897369.728897.818
NODDeveloping tillers at six leaf stage, 3rd internode0.8569450.5518570.8308932.30684
CAR5Developing grain, bracts removed (5 DPA)108.175105.828117.796108.637
CAR15Developing grain, bracts removed (15 DPA)18.037617.024414.261838.6327



CDS Structure of MLOC_18416






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374404
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374404CUST_22658_PI427708080NoneNoneNone
MLOC_18416.1NoneAvailableAvailablecontig_1580491 (Mapped)
MLOC_66198.1NoneAvailableNonecontig_51218 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----