MLOC_18403 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.120031.349411.024021.25534
LEAShoots from the seedlings (10 cm shoot stage)0.4934230.2324250.5971190.371419
INF1Young developing inflorescences (5mm)0.04700990.05558180.1206250.0920859
INF2Developing inflorescences (1-1.5 cm)00.1911230.0582980.195086
ROORoots from the seedlings (10 cm shoot stage)5.318171.9672.079262.79041
NODDeveloping tillers at six leaf stage, 3rd internode1.77863.813144.5243510.8212
CAR5Developing grain, bracts removed (5 DPA)0.3600110.9058580.9774210.871851
CAR15Developing grain, bracts removed (15 DPA)4.212843.432913.5241110.2032



CDS Structure of MLOC_18403






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18403.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18403.1CUST_9679_PI427708080AvailableAvailablecontig_1580421 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g45020.1 +1 2e-25 103 60/108 (56%) 13104.m04507 protein MYB family transcription factor, putative, expressed
TAIR PP10None-----