MLOC_1840 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 3.23772 | 6.85592 | 6.08207 | 5.40563 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.3532 | 14.6 | 11.4242 | 10.3562 |
| INF1 | Young developing inflorescences (5mm) | 3.02159 | 3.25676 | 3.36833 | 2.91081 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.05576 | 5.81348 | 4.759 | 5.91398 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.47885 | 5.95235 | 4.48641 | 6.87598 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 4.63541 | 5.70183 | 7.41993 | 20.7856 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 11.5997 | 13.7571 | 11.9979 | 12.0453 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.70372 | 6.01698 | 5.44169 | 12.8029 |
CDS Structure of MLOC_1840
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_1840.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g08050.1 |
+2 |
6e-107 |
331 |
161/179 (90%) |
13103.m30164 protein elongation factor Tu, putative, expressed |
| TAIR PP10 |
AT1G07930.2 |
+2 |
8e-108 |
330 |
160/179 (89%) |
GTP binding Elongation factor Tu family protein | chr1:2459014-2460458 FORWARD LENGTH=372 |
