MLOC_18390 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.688555.804214.597930
LEAShoots from the seedlings (10 cm shoot stage)2.534722.087790.5351690
INF1Young developing inflorescences (5mm)15.105213.342111.94910
INF2Developing inflorescences (1-1.5 cm)11.022614.540610.24170
ROORoots from the seedlings (10 cm shoot stage)02.889494.745490
NODDeveloping tillers at six leaf stage, 3rd internode1.198610.1759290.4534050
CAR5Developing grain, bracts removed (5 DPA)3.692193.574745.163350
CAR15Developing grain, bracts removed (15 DPA)1.319391.496310.7321110



CDS Structure of MLOC_18390






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK372459
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372459CUST_22318_PI427708080NoneNoneNone
MLOC_18390.1NoneAvailableNonecontig_1580384 (Mapped)
MLOC_52520.1NoneAvailableNonecontig_37586 (Mapped)
MLOC_74684.1NoneAvailableAvailablecontig_6634 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----