- Predicted Gene MLOC_18367
MLOC_18367 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 2.69593 | 1.70155 | 1.41889 | 1.58775 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.48753 | 1.63807 | 1.57009 | 1.3997 |
| INF1 | Young developing inflorescences (5mm) | 1.64664 | 1.66417 | 3.03858 | 1.29359 |
| INF2 | Developing inflorescences (1-1.5 cm) | 1.62588 | 1.58649 | 2.22284 | 1.52226 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.03186 | 1.69083 | 1.68163 | 1.67665 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.28791 | 3.04157 | 2.58935 | 8.00752 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 1.97087 | 2.19813 | 0.958203 | 1.38291 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.38509 | 0.50559 | 0.161535 | 0.686199 |
CDS Structure of MLOC_18367
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18367.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g36630.1 |
+1 |
1e-21 |
94 |
44/56 (79%) |
13103.m04000 protein expressed protein |
| TAIR PP10 |
AT4G01897.1 |
+1 |
2e-15 |
74 |
32/52 (62%) |
unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF952 (InterPro:IPR009297); Has 763 Blast hits to 763 proteins in 180 species: Archae - 0; Bacteria - 351; Metazoa - 0; Fungi - 0; Plants - 29; Viruses - 0; Other Eukaryotes - 383 (source: NCBI BLink). | chr4:820487-821466 REVERSE LENGTH=122 |