- Predicted Gene MLOC_18353
MLOC_18353 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_18353_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_18353_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.80467 | 6.65025 | 7.03195 | 7.53381 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.11719 | 3.6959 | 6.11166 | 4.86265 |
INF1 | Young developing inflorescences (5mm) | 4.57757 | 5.17523 | 5.70746 | 4.49907 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.71621 | 5.64623 | 6.16463 | 6.0282 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.63048 | 8.45055 | 5.64421 | 9.82815 |
NOD | Developing tillers at six leaf stage, 3rd internode | 17.4862 | 19.2352 | 9.17629 | 54.4224 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.90818 | 7.61956 | 7.04096 | 7.1911 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.29155 | 1.77345 | 1.92822 | 4.94827 |
CDS Structure of MLOC_18353
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18353.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os09g26800.1 |
+2 |
0.0 |
838 |
433/497 (87%) |
13109.m02592 protein polygalacturonase, putative, expressed |
TAIR PP10 |
AT1G19170.1 |
+2 |
0.0 |
638 |
301/421 (71%) |
Pectin lyase-like superfamily protein | chr1:6616777-6618875 FORWARD LENGTH=506 |