- Predicted Gene MLOC_18346
MLOC_18346 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_18346_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_18346_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.4303 | 4.29095 | 3.89429 | 4.51396 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.94403 | 1.52112 | 1.72706 | 1.67046 |
INF1 | Young developing inflorescences (5mm) | 7.61713 | 8.44349 | 8.74155 | 7.48105 |
INF2 | Developing inflorescences (1-1.5 cm) | 9.7992 | 9.46191 | 9.17149 | 10.7037 |
ROO | Roots from the seedlings (10 cm shoot stage) | 4.19487 | 3.50789 | 2.82588 | 3.9603 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.91792 | 2.43749 | 1.91946 | 6.9304 |
CAR5 | Developing grain, bracts removed (5 DPA) | 7.00721 | 6.44114 | 7.51572 | 6.97137 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.11661 | 1.75398 | 1.88565 | 4.70756 |
CDS Structure of MLOC_18346
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18346.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g59070.1 |
-1 |
0.0 |
576 |
331/473 (70%) |
13101.m06274 protein expressed protein |
TAIR PP10 |
AT4G12700.1 |
-1 |
1e-105 |
331 |
181/430 (42%) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G04280.1); Has 136 Blast hits to 136 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | chr4:7482643-7484328 REVERSE LENGTH=561 |