MLOC_18326 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.550556.67876.409396.85782
LEAShoots from the seedlings (10 cm shoot stage)45.532664.033668.172450.3109
INF1Young developing inflorescences (5mm)9.1954210.505712.16479.44951
INF2Developing inflorescences (1-1.5 cm)17.504712.33916.221116.943
ROORoots from the seedlings (10 cm shoot stage)28.400316.128816.866821.1982
NODDeveloping tillers at six leaf stage, 3rd internode3.191916.2411117.935426.4012
CAR5Developing grain, bracts removed (5 DPA)4.886255.97075.565615.57486
CAR15Developing grain, bracts removed (15 DPA)1.35011.420431.073253.22293



CDS Structure of MLOC_18326






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18326.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK370434NoneNoneNoneNone
MLOC_18326.1CUST_1768_PI427708080AvailableAvailablecontig_158014 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g19240.1 +3 0.0 1046 520/567 (92%) 13103.m02299 protein AMP-binding enzyme, putative, expressed
TAIR PP10 AT3G16910.1 +3 0.0 852 410/563 (73%) | Symbols: AAE7, ACN1 | acyl-activating enzyme 7 | chr3:5773231-5775411 REVERSE LENGTH=569