MLOC_18325 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.317533.300653.397833.1679
LEAShoots from the seedlings (10 cm shoot stage)0.1261330.07646730.07601750.070224
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)3.267562.970772.479012.77337
NODDeveloping tillers at six leaf stage, 3rd internode00.05111310.01144790.144855
CAR5Developing grain, bracts removed (5 DPA)00.03912800.0402364
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_18325






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18325.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18325.1CUST_9669_PI427708080AvailableAvailablecontig_1580129 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g26690.1 +1 4e-148 430 208/271 (77%) 13107.m02646 protein aquaporin protein, putative, expressed
TAIR PP10 AT3G53420.2 +1 5e-144 418 201/277 (73%) | Symbols: PIP2A, PIP2, PIP2;1 | plasma membrane intrinsic protein 2A | chr3:19803906-19805454 REVERSE LENGTH=287