MLOC_18277 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.0433713.580313.188611.6164
LEAShoots from the seedlings (10 cm shoot stage)10.25377.976594.460876.08334
INF1Young developing inflorescences (5mm)10.18829.763939.446728.37439
INF2Developing inflorescences (1-1.5 cm)12.11849.3770310.78611.8106
ROORoots from the seedlings (10 cm shoot stage)4.5188.6521510.98879.30892
NODDeveloping tillers at six leaf stage, 3rd internode10.27994.099185.9369812.2737
CAR5Developing grain, bracts removed (5 DPA)9.239239.594167.51288.79494
CAR15Developing grain, bracts removed (15 DPA)6.861855.820676.7581515.8018



CDS Structure of MLOC_18277






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18277.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18277.1CUST_11567_PI427708083AvailableAvailablecontig_1579958 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g31100.1 -1 1e-13 75 52/56 (93%) 13106.m03219 protein E1-BTB2 - Bric-a-Brac, Tramtrack, and Broad Complex domain with E1 subfamily conserved sequence, expressed
TAIR PP10None-----