- Predicted Gene MLOC_18267
MLOC_18267 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_18267_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_18267_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 5.65257 | 5.54655 | 6.50411 | 6.96159 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.9652 | 2.04995 | 2.55276 | 2.53537 |
INF1 | Young developing inflorescences (5mm) | 13.7581 | 17.5208 | 17.4108 | 16.9734 |
INF2 | Developing inflorescences (1-1.5 cm) | 22.9439 | 20.3167 | 21.6448 | 27.5238 |
ROO | Roots from the seedlings (10 cm shoot stage) | 3.66338 | 7.66096 | 5.29249 | 10.4646 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.188677 | 0.477737 | 1.17174 | 2.20314 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.67705 | 11.4645 | 8.54691 | 11.8207 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.43732 | 1.62486 | 2.53917 | 6.04667 |
CDS Structure of MLOC_18267
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18267.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g40680.1 |
+1 |
1e-31 |
115 |
55/88 (63%) |
13102.m04535 protein mis12 protein, expressed |
TAIR PP10 |
AT5G35520.1 |
+1 |
5e-11 |
58 |
29/89 (33%) |
| Symbols: MIS12, ATMIS12 | minichromosome instability 12 (mis12)-like | chr5:13701396-13702925 FORWARD LENGTH=238 |