- Predicted Gene MLOC_18223
MLOC_18223 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.66056 | 3.96699 | 3.3369 | 3.43665 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 4.32768 | 3.35322 | 4.10268 | 2.80759 |
| INF1 | Young developing inflorescences (5mm) | 4.32824 | 5.46932 | 4.27953 | 3.44544 |
| INF2 | Developing inflorescences (1-1.5 cm) | 5.3837 | 4.64412 | 4.4784 | 4.8472 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.42223 | 3.82897 | 4.26973 | 4.02218 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.66162 | 3.06405 | 5.70309 | 9.2379 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 4.69664 | 4.6534 | 4.71363 | 4.11232 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.48109 | 1.28442 | 1.39715 | 2.92088 |
CDS Structure of MLOC_18223
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18223.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os05g02690.1 |
+2 |
3e-65 |
222 |
171/235 (73%) |
13105.m00241 protein sensitivity to red light reduced protein 1, putative, expressed |
| TAIR PP10 |
AT5G59560.2 |
+2 |
1e-19 |
91 |
52/130 (40%) |
| Symbols: SRR1 | sensitivity to red light reduced protein (SRR1) | chr5:24000747-24001574 REVERSE LENGTH=275 |