MLOC_18196 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains10.519522.474221.436515.2848
LEAShoots from the seedlings (10 cm shoot stage)15.12915.542125.05316.98266
INF1Young developing inflorescences (5mm)17.778815.0812.198510.5743
INF2Developing inflorescences (1-1.5 cm)9.2700710.84029.677618.94987
ROORoots from the seedlings (10 cm shoot stage)7.190916.160313.684114.1524
NODDeveloping tillers at six leaf stage, 3rd internode4.652793.579753.8227710.5471
CAR5Developing grain, bracts removed (5 DPA)16.522415.491916.120412.2696
CAR15Developing grain, bracts removed (15 DPA)6.211475.078245.0741110.0252



CDS Structure of MLOC_18196






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367917
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367917CUST_21544_PI427708080NoneNoneNone
MLOC_12072.1NoneAvailableNonecontig_1562473 (Mapped)
MLOC_18196.1NoneAvailableAvailablecontig_1579658 (Mapped)
MLOC_79851.1NoneAvailableNonecontig_87245 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----