- Predicted Gene MLOC_18158
MLOC_18158 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 29.3726 | 20.165 | 21.8445 | 19.0921 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 17.0837 | 16.9945 | 17.6863 | 12.0893 |
| INF1 | Young developing inflorescences (5mm) | 13.6892 | 14.0851 | 19.7413 | 10.1394 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.452 | 17.825 | 17.119 | 14.0769 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 20.6994 | 19.4562 | 19.4316 | 18.4054 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.0047 | 17.0119 | 22.1143 | 45.7068 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 13.6672 | 15.6023 | 16.2962 | 11.0374 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 5.53447 | 4.2604 | 4.93781 | 8.86812 |
CDS Structure of MLOC_18158
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18158.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os10g34540.1 |
-3 |
5e-15 |
76 |
35/37 (95%) |
13110.m03075 protein tetratricopeptide repeat protein 1, putative, expressed |
| TAIR PP10 |
AT4G30480.2 |
-3 |
7e-14 |
72 |
32/36 (89%) |
| Symbols: TPR1, AtTPR1 | Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:14897500-14898937 FORWARD LENGTH=277 |