MLOC_18157 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.177990.5684890.7799270.809795
LEAShoots from the seedlings (10 cm shoot stage)0.514540.08916510.2357410.265752
INF1Young developing inflorescences (5mm)2.298132.824352.50592.18344
INF2Developing inflorescences (1-1.5 cm)2.14052.497072.111472.49482
ROORoots from the seedlings (10 cm shoot stage)0.779180.8931140.4820341.04234
NODDeveloping tillers at six leaf stage, 3rd internode0.2113040.5333970.5677721.75321
CAR5Developing grain, bracts removed (5 DPA)2.013572.621412.517932.34831
CAR15Developing grain, bracts removed (15 DPA)1.893261.17421.71723.69706



CDS Structure of MLOC_18157






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18157.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18157.1CUST_2615_PI427708083AvailableAvailablecontig_1579478 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os06g15820.1 +1 3e-25 107 49/52 (94%) 13106.m01745 protein NHL repeat-containing protein, putative, expressed
TAIR PP10None-----