MLOC_18137 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.228494.802244.424674.50803
LEAShoots from the seedlings (10 cm shoot stage)3.425550.7377341.308531.59663
INF1Young developing inflorescences (5mm)12.035911.513311.95519.96459
INF2Developing inflorescences (1-1.5 cm)13.682112.892613.046714.5518
ROORoots from the seedlings (10 cm shoot stage)2.074253.532762.852413.84699
NODDeveloping tillers at six leaf stage, 3rd internode0.6037860.9676790.7462982.97714
CAR5Developing grain, bracts removed (5 DPA)5.616615.612996.488845.77796
CAR15Developing grain, bracts removed (15 DPA)1.524331.369461.26283.24458



CDS Structure of MLOC_18137






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18137.3
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK358213NoneNoneNoneNone
MLOC_18137.3CUST_17953_PI427708080AvailableAvailablecontig_1579361 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g44560.1 -3 4e-163 486 280/497 (56%) 13108.m04846 protein expressed protein
TAIR PP10 AT3G45750.1 -3 6e-83 279 163/360 (45%) Nucleotidyltransferase family protein | chr3:16793855-16797380 REVERSE LENGTH=682