- Predicted Gene MLOC_18083
MLOC_18083 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_18083_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_18083_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.221529 | 0.371279 | 0.463939 | 0.327079 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.86937 | 0.577459 | 0.244279 | 0.514292 |
INF1 | Young developing inflorescences (5mm) | 4.13759 | 5.83355 | 6.14105 | 4.68637 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.4922 | 11.9161 | 11.3098 | 13.9033 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 0.60756 | 0.40742 | 1.03974 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.175039 | 0.253282 | 0.266481 | 0.908377 |
CAR5 | Developing grain, bracts removed (5 DPA) | 9.02527 | 8.49711 | 8.25057 | 8.67363 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.633359 | 0.455151 | 0.708307 | 1.35537 |
CDS Structure of MLOC_18083
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_18083.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g28060.3 |
+2 |
2e-51 |
183 |
122/296 (41%) |
13106.m10544 protein ATP-binding region, ATPase-like domain containing protein, expressed |
TAIR PP10 |
AT1G19100.1 |
+2 |
2e-20 |
94 |
44/73 (60%) |
Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein | chr1:6595560-6601159 FORWARD LENGTH=663 |