MLOC_18081 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains35.464130.061329.426333.5099
LEAShoots from the seedlings (10 cm shoot stage)258.868451.829308.105301.891
INF1Young developing inflorescences (5mm)8.420018.403816.247817.2313
INF2Developing inflorescences (1-1.5 cm)4.940723.1233.249824.57471
ROORoots from the seedlings (10 cm shoot stage)39.630251.887657.393970.2536
NODDeveloping tillers at six leaf stage, 3rd internode113.481107.612287.213469.653
CAR5Developing grain, bracts removed (5 DPA)24.518243.873943.812944.3325
CAR15Developing grain, bracts removed (15 DPA)9.0010111.24029.3265826.5536



CDS Structure of MLOC_18081






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18081.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376342NoneNoneNoneNone
MLOC_18081.1CUST_1749_PI427708080AvailableAvailablecontig_1579154 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g18340.1 -2 3e-23 96 79/163 (48%) 13110.m01505 protein expressed protein
TAIR PP10None-----