MLOC_18035 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains71.104958.521659.588465.6371
LEAShoots from the seedlings (10 cm shoot stage)54.224644.550451.684945.9817
INF1Young developing inflorescences (5mm)60.672954.553559.304450.9444
INF2Developing inflorescences (1-1.5 cm)42.564950.844651.714653.5067
ROORoots from the seedlings (10 cm shoot stage)65.817268.665670.998688.871
NODDeveloping tillers at six leaf stage, 3rd internode68.861559.62366.8773220.923
CAR5Developing grain, bracts removed (5 DPA)40.003440.051441.715239.6912
CAR15Developing grain, bracts removed (15 DPA)8.680228.978657.7892119.8446



CDS Structure of MLOC_18035






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18035.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18035.1CUST_9639_PI427708080AvailableAvailablecontig_1579007 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g01230.1 +3 8e-158 452 220/288 (76%) 13104.m00026 protein phosphoglycerate mutase, putative, expressed
TAIR PP10 AT5G64460.8 +3 9e-137 396 190/278 (68%) Phosphoglycerate mutase family protein | chr5:25773009-25775104 REVERSE LENGTH=282