MLOC_18031 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains325.635287.262304.905316.585
LEAShoots from the seedlings (10 cm shoot stage)46.267643.593414.797528.7436
INF1Young developing inflorescences (5mm)76.020589.7276158.681101.284
INF2Developing inflorescences (1-1.5 cm)14.412514.089421.043318.8348
ROORoots from the seedlings (10 cm shoot stage)196.172198.743124.243226.095
NODDeveloping tillers at six leaf stage, 3rd internode110.6748.710715.2346113.523
CAR5Developing grain, bracts removed (5 DPA)226.765224.01212.152234.562
CAR15Developing grain, bracts removed (15 DPA)9.364449.497959.238224.6074



CDS Structure of MLOC_18031






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18031.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364792NoneNoneNoneNone
MLOC_18031.1CUST_1745_PI427708080AvailableAvailablecontig_1578987 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g49840.1 +3 0.0 550 286/403 (71%) 13105.m05338 protein phospholipase, putative, expressed
TAIR PP10 AT4G18550.1 +3 3e-124 379 207/394 (53%) alpha/beta-Hydrolases superfamily protein | chr4:10225006-10226862 REVERSE LENGTH=419