MLOC_18026 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains5.706493.541794.405253.55075
LEAShoots from the seedlings (10 cm shoot stage)1.280910.8237220.8699720.728643
INF1Young developing inflorescences (5mm)7.303457.894657.796234.88307
INF2Developing inflorescences (1-1.5 cm)4.306334.70534.290263.90153
ROORoots from the seedlings (10 cm shoot stage)2.771473.179853.600592.8485
NODDeveloping tillers at six leaf stage, 3rd internode0.5345970.7267990.4014791.69762
CAR5Developing grain, bracts removed (5 DPA)4.934425.732875.946834.05486
CAR15Developing grain, bracts removed (15 DPA)1.189220.996471.33112.03362



CDS Structure of MLOC_18026






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18026.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18026.2CUST_11558_PI427708083AvailableAvailablecontig_1578959 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g44394.1 +1 4e-18 86 38/43 (88%) 13101.m04603 protein mitotic checkpoint protein, putative, expressed
TAIR PP10 AT1G80670.1 +1 8e-13 69 29/41 (71%) Transducin/WD40 repeat-like superfamily protein | chr1:30320809-30323543 REVERSE LENGTH=349