MLOC_18022 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.563771.11471.987951.62773
LEAShoots from the seedlings (10 cm shoot stage)0.2446160.073309900.136997
INF1Young developing inflorescences (5mm)0000
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)5.110723.059432.773893.42146
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)0000
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_18022






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_18022.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_18022.1CUST_2598_PI427708083AvailableAvailablecontig_157892 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g44780.1 +2 4e-103 298 171/297 (58%) 13107.m04714 protein GDSL-like lipase/acylhydrolase, putative, expressed
TAIR PP10 AT1G28570.1 +2 1e-61 188 122/293 (42%) SGNH hydrolase-type esterase superfamily protein | chr1:10041838-10044112 REVERSE LENGTH=389