MLOC_17998 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains16.260921.141821.469820.2581
LEAShoots from the seedlings (10 cm shoot stage)26.120922.168725.167821.0114
INF1Young developing inflorescences (5mm)35.411137.953237.821630.0283
INF2Developing inflorescences (1-1.5 cm)37.148344.348938.832443.3497
ROORoots from the seedlings (10 cm shoot stage)15.092519.925115.793622.7879
NODDeveloping tillers at six leaf stage, 3rd internode20.341125.254425.402982.3027
CAR5Developing grain, bracts removed (5 DPA)20.007619.168618.837418.34
CAR15Developing grain, bracts removed (15 DPA)10.44059.407249.3155221.7992



CDS Structure of MLOC_17998






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364917
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364917CUST_20991_PI427708080NoneNoneNone
MLOC_10767.1NoneAvailableNonecontig_1559747 (Mapped)
MLOC_17998.1NoneAvailableAvailablecontig_1578850 (Mapped)
MLOC_24695.2NoneAvailableNonecontig_1651322 (Mapped)
MLOC_39683.1NoneAvailableNonecontig_2554298 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----