MLOC_17989 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.488414.349313.866264.03647
LEAShoots from the seedlings (10 cm shoot stage)2.094911.2204601.40673
INF1Young developing inflorescences (5mm)0.06270980.03478710.03957310.0415396
INF2Developing inflorescences (1-1.5 cm)0000
ROORoots from the seedlings (10 cm shoot stage)49.760245.014337.298754.8631
NODDeveloping tillers at six leaf stage, 3rd internode0000
CAR5Developing grain, bracts removed (5 DPA)00.034265400.0461013
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_17989






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17989.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17989.1CUST_9633_PI427708080AvailableAvailablecontig_1578813 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os04g32920.5 -3 0.0 559 285/333 (86%) 13104.m03166 protein potassium transporter, putative, expressed
TAIR PP10 AT4G13420.1 -3 1e-132 404 200/321 (62%) | Symbols: HAK5, ATHAK5 | high affinity K+ transporter 5 | chr4:7797038-7802174 REVERSE LENGTH=785