MLOC_17951 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.687974.875498.231383.49917
LEAShoots from the seedlings (10 cm shoot stage)5.23282.48932.383452.20309
INF1Young developing inflorescences (5mm)6.421618.263468.473643.87894
INF2Developing inflorescences (1-1.5 cm)7.126166.157986.785234.93938
ROORoots from the seedlings (10 cm shoot stage)1.586321.877160.791341.32056
NODDeveloping tillers at six leaf stage, 3rd internode2.617773.458915.558578.69037
CAR5Developing grain, bracts removed (5 DPA)2.869963.564442.901851.91883
CAR15Developing grain, bracts removed (15 DPA)2.43761.675631.685173.09003



CDS Structure of MLOC_17951






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17951.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17951.2NoneAvailableAvailablecontig_1578669 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g38250.1 -2 2e-44 161 81/123 (66%) 13102.m04206 protein EMB1745, putative, expressed
TAIR PP10 AT1G13120.1 -2 2e-12 68 32/82 (39%) | chr1:4469334-4472775 REVERSE LENGTH=611