MLOC_17939 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains28.862237.455836.238837.0479
LEAShoots from the seedlings (10 cm shoot stage)28.771919.428814.773918.2433
INF1Young developing inflorescences (5mm)82.812775.236670.180169.3204
INF2Developing inflorescences (1-1.5 cm)56.511161.450359.726169.4868
ROORoots from the seedlings (10 cm shoot stage)18.174334.337732.58638.9046
NODDeveloping tillers at six leaf stage, 3rd internode14.60537.696159.8196524.1332
CAR5Developing grain, bracts removed (5 DPA)54.131653.105153.043255.5513
CAR15Developing grain, bracts removed (15 DPA)12.10910.210213.762229.1167



CDS Structure of MLOC_17939






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK251541.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251541.1CUST_23446_PI427708080NoneNoneNone
MLOC_17939.1NoneAvailableAvailablecontig_1578638 (Mapped)
MLOC_28656.1NoneAvailableNonecontig_1937626 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----