MLOC_17878 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains14.769738.428638.87650
LEAShoots from the seedlings (10 cm shoot stage)29.733719.313815.11750
INF1Young developing inflorescences (5mm)51.852939.180936.98820
INF2Developing inflorescences (1-1.5 cm)28.649531.158427.71030
ROORoots from the seedlings (10 cm shoot stage)10.80726.488422.68840
NODDeveloping tillers at six leaf stage, 3rd internode11.59889.702289.676270
CAR5Developing grain, bracts removed (5 DPA)35.428829.581936.40060
CAR15Developing grain, bracts removed (15 DPA)9.0398.24218.949450



CDS Structure of MLOC_17878






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK364634
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK364634CUST_20942_PI427708080NoneNoneNone
MLOC_15368.1NoneAvailableAvailablecontig_1570529 (Mapped)
MLOC_15824.1NoneAvailableNonecontig_1571625 (Mapped)
MLOC_17878.1NoneAvailableNonecontig_1578380 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----