- Predicted Gene MLOC_17850
MLOC_17850 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_17850_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_17850_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 15.6914 | 12.9828 | 12.7657 | 13.6877 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 9.74119 | 11.7595 | 14.6026 | 10.0429 |
INF1 | Young developing inflorescences (5mm) | 13.7802 | 16.5695 | 16.2792 | 13.3777 |
INF2 | Developing inflorescences (1-1.5 cm) | 13.0894 | 14.298 | 14.0616 | 15.5848 |
ROO | Roots from the seedlings (10 cm shoot stage) | 21.851 | 18.7598 | 18.8543 | 22.7295 |
NOD | Developing tillers at six leaf stage, 3rd internode | 12.8582 | 18.0092 | 31.5018 | 66.5796 |
CAR5 | Developing grain, bracts removed (5 DPA) | 13.3004 | 12.3571 | 12.5219 | 12.7624 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.69346 | 2.65697 | 3.07718 | 6.69172 |
CDS Structure of MLOC_17850
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17850.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os06g22820.1 |
+2 |
0.0 |
714 |
365/471 (77%) |
13106.m02452 protein cyclin-dependent kinase F-1, putative, expressed |
TAIR PP10 |
AT4G28980.1 |
+2 |
9e-157 |
461 |
239/475 (50%) |
| Symbols: CDKF;1, CAK1AT | CDK-activating kinase 1AT | chr4:14288471-14290102 FORWARD LENGTH=479 |