MLOC_17803 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains74.508552.100855.483251.7263
LEAShoots from the seedlings (10 cm shoot stage)58.006311.710521.466722.9007
INF1Young developing inflorescences (5mm)6.393934.623816.33284.5741
INF2Developing inflorescences (1-1.5 cm)5.60826.093548.799086.78654
ROORoots from the seedlings (10 cm shoot stage)54.462836.330131.997435.0055
NODDeveloping tillers at six leaf stage, 3rd internode40.053727.323125.88660.7285
CAR5Developing grain, bracts removed (5 DPA)54.850260.499550.257751.0476
CAR15Developing grain, bracts removed (15 DPA)25.876633.090623.981565.0842



CDS Structure of MLOC_17803






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17803.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17803.1CUST_9616_PI427708080AvailableAvailablecontig_1578116 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g02400.1 +3 3e-50 172 82/122 (67%) 13103.m00196 protein plastocyanin-like domain containing protein, putative, expressed
TAIR PP10 AT1G64640.1 +3 2e-32 123 62/122 (51%) | Symbols: ENODL8, AtENODL8 | early nodulin-like protein 8 | chr1:24022482-24023151 REVERSE LENGTH=191