- Predicted Gene MLOC_17796
MLOC_17796 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 25.8381 | 29.2239 | 29.1463 | 26.2287 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 50.498 | 27.0454 | 32.9842 | 30.1543 |
| INF1 | Young developing inflorescences (5mm) | 16.9557 | 12.0701 | 12.1995 | 11.1737 |
| INF2 | Developing inflorescences (1-1.5 cm) | 8.9591 | 9.77795 | 10.4905 | 9.72204 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 3.91917 | 5.34639 | 9.13858 | 5.91528 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 28.2127 | 19.9447 | 28.4943 | 64.3201 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 13.6842 | 13.8407 | 16.5093 | 12.7645 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 9.69065 | 7.3179 | 8.43915 | 18.6718 |
CDS Structure of MLOC_17796
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17796.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os07g38110.2 |
+3 |
1e-156 |
447 |
228/272 (84%) |
13107.m03935 protein tic20, putative, expressed |
| TAIR PP10 |
AT1G04940.1 |
+3 |
1e-56 |
190 |
89/192 (46%) |
| Symbols: TIC20 | translocon at the inner envelope membrane of chloroplasts 20 | chr1:1399588-1400616 FORWARD LENGTH=274 |