MLOC_17787 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains33.922527.540434.478231.026
LEAShoots from the seedlings (10 cm shoot stage)18.81983.739525.150917.79451
INF1Young developing inflorescences (5mm)16.806214.497314.153513.7898
INF2Developing inflorescences (1-1.5 cm)12.10115.282814.326616.0266
ROORoots from the seedlings (10 cm shoot stage)5.57337.4607712.31048.98383
NODDeveloping tillers at six leaf stage, 3rd internode3.953392.753110.6168776.5605
CAR5Developing grain, bracts removed (5 DPA)33.982837.829437.392236.9868
CAR15Developing grain, bracts removed (15 DPA)3.633132.776444.654668.9876



CDS Structure of MLOC_17787






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK355082
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355082CUST_23759_PI427708080NoneNoneNone
MLOC_17787.2NoneAvailableAvailablecontig_1578020 (Mapped)
MLOC_26796.1NoneAvailableNonecontig_1780091 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----