MLOC_17768 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.7133180.7877330.6510240.670269
LEAShoots from the seedlings (10 cm shoot stage)2.226862.152612.953961.7995
INF1Young developing inflorescences (5mm)1.323561.274532.689641.40308
INF2Developing inflorescences (1-1.5 cm)1.688611.845441.79081.90008
ROORoots from the seedlings (10 cm shoot stage)0.2802270.5234170.243320.44851
NODDeveloping tillers at six leaf stage, 3rd internode2.383564.714658.0601614.1723
CAR5Developing grain, bracts removed (5 DPA)1.305490.9086281.202081.04873
CAR15Developing grain, bracts removed (15 DPA)2.991673.549051.77716.98451



CDS Structure of MLOC_17768






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17768.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17768.1CUST_2556_PI427708083AvailableAvailablecontig_1577968 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g02770.1 +2 2e-19 92 56/122 (46%) 13102.m00232 protein PPR repeat domain containing protein, putative, expressed
TAIR PP10None-----