- Predicted Gene MLOC_17764
MLOC_17764 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_17764_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_17764_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 3.34744 | 6.56371 | 5.27976 | 5.18709 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 3.44656 | 2.38873 | 2.59409 | 2.41908 |
INF1 | Young developing inflorescences (5mm) | 21.5882 | 21.8641 | 20.1827 | 16.7962 |
INF2 | Developing inflorescences (1-1.5 cm) | 27.4172 | 27.1143 | 23.0764 | 27.575 |
ROO | Roots from the seedlings (10 cm shoot stage) | 1.35333 | 4.5197 | 3.45274 | 4.60872 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.482944 | 0.385816 | 0.564369 | 1.40794 |
CAR5 | Developing grain, bracts removed (5 DPA) | 8.12666 | 6.85157 | 8.46813 | 7.13174 |
CAR15 | Developing grain, bracts removed (15 DPA) | 2.40108 | 2.36834 | 1.9342 | 4.87355 |
CDS Structure of MLOC_17764
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17764.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os11g08660.1 |
+2 |
0.0 |
1203 |
633/865 (73%) |
13111.m00912 protein TOPBP1A - Similar to DNA replication protein TOPBP1 from, expressed |
TAIR PP10 |
AT1G77320.1 |
+2 |
0.0 |
654 |
386/1003 (38%) |
| Symbols: MEI1 | transcription coactivators | chr1:29056740-29062710 FORWARD LENGTH=972 |