- Predicted Gene MLOC_17680
MLOC_17680 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.55422 | 9.37209 | 7.51067 | 6.72982 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 11.764 | 2.1064 | 2.70744 | 4.69616 |
| INF1 | Young developing inflorescences (5mm) | 11.3032 | 8.69854 | 7.8517 | 7.25782 |
| INF2 | Developing inflorescences (1-1.5 cm) | 11.7057 | 14.0887 | 12.3155 | 12.831 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 2.27598 | 4.74629 | 4.89616 | 4.45668 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 3.83273 | 6.30274 | 4.34339 | 17.5433 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 15.6116 | 13.5937 | 14.251 | 12.4789 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.55246 | 0.877946 | 1.47522 | 2.72133 |
CDS Structure of MLOC_17680
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17680.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g20450.1 |
+1 |
0.0 |
1508 |
834/1035 (81%) |
13103.m02454 protein expressed protein |
| TAIR PP10 |
AT2G27060.1 |
+1 |
0.0 |
805 |
485/1030 (47%) |
Leucine-rich repeat protein kinase family protein | chr2:11551288-11554577 FORWARD LENGTH=1020 |
