- Predicted Gene MLOC_17595
MLOC_17595 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 1.84283 | 3.26258 | 3.11489 | 3.22359 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 1.98882 | 0.325329 | 0.302448 | 0.799664 |
| INF1 | Young developing inflorescences (5mm) | 17.3098 | 16.5946 | 13.8773 | 14.5571 |
| INF2 | Developing inflorescences (1-1.5 cm) | 14.2201 | 14.0871 | 12.341 | 15.5491 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 0.449395 | 2.11093 | 2.08086 | 2.53101 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0587415 | 0.0271527 | 0.0123705 | 0.0845809 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 3.48072 | 3.01589 | 2.55469 | 3.0966 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.37547 | 0.801302 | 1.05439 | 2.68677 |
CDS Structure of MLOC_17595
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17595.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g58630.3 |
+2 |
0.0 |
620 |
340/431 (79%) |
13104.m06161 protein DNA mismatch repair protein MSH3, putative, expressed |
| TAIR PP10 |
AT4G25540.1 |
+2 |
2e-122 |
384 |
228/434 (53%) |
| Symbols: MSH3, ATMSH3 | homolog of DNA mismatch repair protein MSH3 | chr4:13042700-13048115 REVERSE LENGTH=1081 |