- Predicted Gene MLOC_17585
MLOC_17585 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 14.5768 | 15.6917 | 16.2681 | 11.5401 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 23.7499 | 45.054 | 28.5594 | 20.4138 |
| INF1 | Young developing inflorescences (5mm) | 6.97744 | 7.13107 | 7.14018 | 4.47238 |
| INF2 | Developing inflorescences (1-1.5 cm) | 4.19751 | 5.18498 | 5.77069 | 4.09895 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 17.3455 | 19.1642 | 25.2524 | 16.8608 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 23.6469 | 16.8088 | 19.0574 | 47.4496 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 10.3136 | 12.581 | 14.3114 | 8.59554 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 7.66926 | 6.11336 | 6.89841 | 11.8853 |
CDS Structure of MLOC_17585
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17585.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os04g45200.2 |
-1 |
0.0 |
534 |
271/333 (81%) |
13104.m04530 protein DNA binding protein, putative, expressed |
| TAIR PP10 |
AT3G60590.2 |
-1 |
4e-91 |
291 |
159/289 (55%) |
unknown protein; LOCATED IN: chloroplast, chloroplast inner membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G48460.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr3:22398764-22399753 FORWARD LENGTH=329 |