MLOC_17577 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains11.04379.013089.647.7187
LEAShoots from the seedlings (10 cm shoot stage)3.86122.944133.109422.36697
INF1Young developing inflorescences (5mm)14.372216.382620.351710.1389
INF2Developing inflorescences (1-1.5 cm)13.974915.060315.823812.7796
ROORoots from the seedlings (10 cm shoot stage)9.435039.4917512.77419.20622
NODDeveloping tillers at six leaf stage, 3rd internode1.236391.932614.64867.06248
CAR5Developing grain, bracts removed (5 DPA)9.5105112.220711.66718.25336
CAR15Developing grain, bracts removed (15 DPA)4.716225.114324.086427.88968



CDS Structure of MLOC_17577






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK375166
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK375166CUST_22786_PI427708080NoneNoneNone
MLOC_11160.1NoneAvailableNonecontig_1560521 (Mapped)
MLOC_17577.2NoneAvailableAvailablecontig_1577143 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----