- Predicted Gene MLOC_17573
MLOC_17573 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 104.493 | 89.7135 | 87.5975 | 98.7999 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 32.9587 | 19.1538 | 16.468 | 19.9592 |
| INF1 | Young developing inflorescences (5mm) | 43.3835 | 48.9189 | 51.3023 | 43.843 |
| INF2 | Developing inflorescences (1-1.5 cm) | 54.7158 | 40.9577 | 45.9511 | 54.3481 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 96.5738 | 83.8834 | 77.5671 | 106.444 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 124.53 | 201.349 | 121.718 | 650.91 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 63.1354 | 62.471 | 64.6735 | 66.243 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 78.0307 | 69.2479 | 79.4527 | 187.236 |
CDS Structure of MLOC_17573
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17573.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g07570.4 |
+2 |
0.0 |
797 |
409/462 (89%) |
13103.m12933 protein aminotransferase, putative, expressed |
| TAIR PP10 |
AT4G39660.1 |
+2 |
0.0 |
717 |
347/436 (80%) |
| Symbols: AGT2 | alanine:glyoxylate aminotransferase 2 | chr4:18406797-18409262 FORWARD LENGTH=476 |