- Predicted Gene MLOC_17499
MLOC_17499 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.563413 | 0.420218 | 0.0998307 | 0.354185 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0.706843 | 0.875743 | 0.968981 | 0.644676 |
INF1 | Young developing inflorescences (5mm) | 2.60666 | 2.8791 | 4.10852 | 2.89268 |
INF2 | Developing inflorescences (1-1.5 cm) | 2.37948 | 2.3938 | 1.56434 | 2.49778 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.417703 | 0.441646 | 0.0654654 | 0.385883 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.094744 | 0.78724 | 0.0852141 | 1.47808 |
CAR5 | Developing grain, bracts removed (5 DPA) | 1.36832 | 1.80214 | 1.71453 | 1.64736 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0170722 | 0.0205129 | 0.0242945 | 0.0532464 |
CDS Structure of MLOC_17499
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17499.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g49920.1 |
+1 |
0.0 |
811 |
423/486 (87%) |
13102.m05669 protein 3-ketoacyl-CoA synthase, putative, expressed |
TAIR PP10 |
AT1G25450.1 |
+1 |
0.0 |
561 |
283/490 (58%) |
| Symbols: KCS5, CER60 | 3-ketoacyl-CoA synthase 5 | chr1:8938679-8940282 REVERSE LENGTH=492 |