MLOC_17491 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.8699150.9153280.6681240.851202
LEAShoots from the seedlings (10 cm shoot stage)0.781398000.781913
INF1Young developing inflorescences (5mm)0.4830020.438760.8602270.510335
INF2Developing inflorescences (1-1.5 cm)0.1963730.1202660.3390960.229737
ROORoots from the seedlings (10 cm shoot stage)1.084060.5132651.437640.844664
NODDeveloping tillers at six leaf stage, 3rd internode1.218171.145471.730073.69136
CAR5Developing grain, bracts removed (5 DPA)0.7169020.3660340.4950480.514359
CAR15Developing grain, bracts removed (15 DPA)0.07033240.07521360.2069350.298942



CDS Structure of MLOC_17491






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17491.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17491.1NoneAvailableAvailablecontig_1576875 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g43160.1 +1 1e-11 64 31/39 (79%) 13108.m04672 protein TCP family transcription factor, putative, expressed
TAIR PP10None-----