- Predicted Gene MLOC_17477
MLOC_17477 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 4.82945 | 6.49023 | 5.97933 | 6.29203 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 2.67726 | 0.233449 | 0.470601 | 0.902252 |
| INF1 | Young developing inflorescences (5mm) | 21.7475 | 21.9482 | 17.4533 | 19.0634 |
| INF2 | Developing inflorescences (1-1.5 cm) | 25.5476 | 33.1692 | 24.0761 | 34.3944 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 4.02563 | 4.82852 | 5.35892 | 5.41085 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.0690725 | 0.131446 | 0.0884241 | 0.315113 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 9.52142 | 8.63646 | 8.44023 | 9.47722 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 0.584447 | 0.131938 | 0.720407 | 1.15094 |
CDS Structure of MLOC_17477
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17477.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g36890.1 |
-3 |
0.0 |
1848 |
1001/1231 (81%) |
13112.m03784 protein CSLD4 - cellulose synthase-like family D, expressed |
| TAIR PP10 |
AT1G02730.1 |
-3 |
0.0 |
1541 |
843/1225 (69%) |
| Symbols: ATCSLD5, CSLD5, SOS6 | cellulose synthase-like D5 | chr1:594697-598473 REVERSE LENGTH=1181 |