MLOC_17475 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.079737.056737.96160
LEAShoots from the seedlings (10 cm shoot stage)37.138823.604922.28690
INF1Young developing inflorescences (5mm)28.666334.287527.46970
INF2Developing inflorescences (1-1.5 cm)30.789531.10933.79180
ROORoots from the seedlings (10 cm shoot stage)31.372231.935327.71090
NODDeveloping tillers at six leaf stage, 3rd internode30.20129.791120.68810
CAR5Developing grain, bracts removed (5 DPA)51.553341.262843.36020
CAR15Developing grain, bracts removed (15 DPA)24.53921.469422.08070



CDS Structure of MLOC_17475






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK362062
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK362062CUST_20484_PI427708080NoneNoneNone
MLOC_17475.4NoneAvailableNonecontig_1576827 (Not mapped)
MLOC_17932.1NoneAvailableAvailablecontig_1578621 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----