- Predicted Gene MLOC_17457
MLOC_17457 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 17.0513 | 28.4102 | 27.3007 | 27.8664 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 30.1735 | 24.3494 | 20.2933 | 24.9841 |
| INF1 | Young developing inflorescences (5mm) | 86.4396 | 81.8865 | 82.9773 | 75.5554 |
| INF2 | Developing inflorescences (1-1.5 cm) | 122.856 | 119.176 | 103.14 | 141.194 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 12.3461 | 26.6887 | 18.7536 | 37.3988 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.5681 | 23.2288 | 24.1093 | 104.577 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 40.7697 | 38.6719 | 43.5446 | 45.1386 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 18.9663 | 17.0309 | 15.644 | 42.4647 |
CDS Structure of MLOC_17457
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17457.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g20410.1 |
-2 |
0.0 |
756 |
445/787 (57%) |
13102.m02285 protein GTP binding protein, putative, expressed |
| TAIR PP10 |
AT5G46070.1 |
-2 |
0.0 |
650 |
386/785 (49%) |
Guanylate-binding family protein | chr5:18683468-18688397 FORWARD LENGTH=1082 |