MLOC_17384 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2585750.3643040.5408210.334077
LEAShoots from the seedlings (10 cm shoot stage)0.8113150.7462970.1330480.425433
INF1Young developing inflorescences (5mm)0.5852870.6986260.5700610.499051
INF2Developing inflorescences (1-1.5 cm)0.7191850.3600060.06972890.439165
ROORoots from the seedlings (10 cm shoot stage)0.3211731.272680.7082440.961629
NODDeveloping tillers at six leaf stage, 3rd internode655.524544.075153.151057.63
CAR5Developing grain, bracts removed (5 DPA)0.03715430.140810.1785960.100191
CAR15Developing grain, bracts removed (15 DPA)0.07726220.029800400.174734



CDS Structure of MLOC_17384






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_17384.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_17384.1CUST_9561_PI427708080AvailableAvailablecontig_1576537 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g41860.2 -2 7e-134 396 200/283 (71%) 13102.m04623 protein aquaporin protein, putative, expressed
TAIR PP10 AT4G35100.2 -2 9e-130 384 194/258 (75%) | Symbols: PIP3 | plasma membrane intrinsic protein 3 | chr4:16708672-16709958 FORWARD LENGTH=280