- Predicted Gene MLOC_17381
MLOC_17381 FPKM values
| FPKM by Treatment | FPKM by Replicate |
|---|
| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.2309 | 4.27515 | 4.31726 | 4.0104 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.0942 | 15.6664 | 12.6186 | 9.21786 |
| INF1 | Young developing inflorescences (5mm) | 7.90654 | 8.77597 | 9.53693 | 6.48094 |
| INF2 | Developing inflorescences (1-1.5 cm) | 6.27227 | 7.13554 | 9.02292 | 6.72557 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 5.6109 | 6.02624 | 14.1124 | 6.63164 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 22.6042 | 11.1216 | 17.9453 | 33.2091 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 6.67 | 7.6091 | 7.21395 | 5.75421 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 1.86238 | 1.75845 | 2.03035 | 3.80865 |
CDS Structure of MLOC_17381
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_17381.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g35560.1 |
+2 |
2e-73 |
184 |
113/244 (46%) |
13102.m03864 protein OsFBX53 - F-box domain containing protein, expressed |
| TAIR PP10 | None | - | - | - | - | - |
